Joshua Warren, PhD
Associate Professor of Biostatistics
Research & Publications
Biography
News
Locations
Coauthors
Selected Publications
- Spatial‐Temporal Modeling of the Association between Air Pollution Exposure and Preterm Birth: Identifying Critical Windows of ExposureWarren J, Fuentes M, Herring A, Langlois P. Spatial‐Temporal Modeling of the Association between Air Pollution Exposure and Preterm Birth: Identifying Critical Windows of Exposure Biometrics 2012, 68: 1157-1167. PMID: 22568640, PMCID: PMC3422613, DOI: 10.1111/j.1541-0420.2012.01774.x.
- A Distributed Lag Model for Assessing Critical Exposure and Outcome Windows in a Study of Air Pollution and Preterm BirthChang* H, Warren J, Darrow L, Reich B, Waller L. A Distributed Lag Model for Assessing Critical Exposure and Outcome Windows in a Study of Air Pollution and Preterm Birth ISEE Conference Abstracts 2014, 2014 DOI: 10.1289/isee.2014.p3-604.
- Bayesian spatial design of optimal deep tube well locations in Matlab, BangladeshWarren JL, Perez-Heydrich C, Yunus M. Bayesian spatial design of optimal deep tube well locations in Matlab, Bangladesh Environmetrics 2013, 24: 377-386. PMID: 24839393, PMCID: PMC4018770, DOI: 10.1002/env.2218.
- Global, regional, and national estimates of tuberculosis incidence and case detection among incarcerated individuals from 2000 to 2019: a systematic analysisMartinez L, Warren J, Harries A, Croda J, Espinal M, Olarte R, Avedillo P, Lienhardt C, Bhatia V, Liu Q, Chakaya J, Denholm J, Lin Y, Kawatsu L, Zhu L, Horsburgh C, Cohen T, Andrews J. Global, regional, and national estimates of tuberculosis incidence and case detection among incarcerated individuals from 2000 to 2019: a systematic analysis The Lancet Public Health 2023, 8: e511-e519. PMID: 37393090, DOI: 10.1016/s2468-2667(23)00097-x.
- Social Vulnerability and Groundwater Vulnerability to Contamination From Unconventional Hydrocarbon Extraction in the Appalachian BasinSoriano M, Warren J, Clark C, Johnson N, Siegel H, Deziel N, Saiers J. Social Vulnerability and Groundwater Vulnerability to Contamination From Unconventional Hydrocarbon Extraction in the Appalachian Basin GeoHealth 2023, 7: e2022gh000758. PMID: 37064218, PMCID: PMC10100439, DOI: 10.1029/2022gh000758.
- Development of treatment-decision algorithms for children evaluated for pulmonary tuberculosis: an individual participant data meta-analysisGunasekera K, Marcy O, Muñoz J, Lopez-Varela E, Sekadde M, Franke M, Bonnet M, Ahmed S, Amanullah F, Anwar A, Augusto O, Aurilio R, Banu S, Batool I, Brands A, Cain K, Carratalá-Castro L, Caws M, Click E, Cranmer L, García-Basteiro A, Hesseling A, Huynh J, Kabir S, Lecca L, Mandalakas A, Mavhunga F, Myint A, Myo K, Nampijja D, Nicol M, Orikiriza P, Palmer M, Sant'Anna C, Siddiqui S, Smith J, Song R, Thuong Thuong N, Ung V, van der Zalm M, Verkuijl S, Viney K, Walters E, Warren J, Zar H, Marais B, Graham S, Debray T, Cohen T, Seddon J. Development of treatment-decision algorithms for children evaluated for pulmonary tuberculosis: an individual participant data meta-analysis The Lancet Child & Adolescent Health 2023, 7: 336-346. PMID: 36924781, PMCID: PMC10127218, DOI: 10.1016/s2352-4642(23)00004-4.
- Patterns of Infectious Disease Associated With Injection Drug Use in Massachusetts.Gonsalves G, Paltiel A, Thornhill T, DeMaria A, Cranston K, Klevens R, Warren J. Patterns of Infectious Disease Associated With Injection Drug Use in Massachusetts. Clinical Infectious Diseases 2023, 76: 2134-2139. PMID: 36757712, PMCID: PMC10273381, DOI: 10.1093/cid/ciad073.
- Spatial modeling of Mycobacterium tuberculosis transmission with dyadic genetic relatedness dataWarren J, Chitwood M, Sobkowiak B, Colijn C, Cohen T. Spatial modeling of Mycobacterium tuberculosis transmission with dyadic genetic relatedness data Biometrics 2023 PMID: 36745619, DOI: 10.1111/biom.13836.
- Associations Between Long-Term Air Pollutant Exposure and 30-Day All-Cause Hospital Readmissions in US Patients With StrokeTran P, Warren J, Leifheit E, Goldstein L, Lichtman J. Associations Between Long-Term Air Pollutant Exposure and 30-Day All-Cause Hospital Readmissions in US Patients With Stroke Stroke 2023, 54: e126-e129. PMID: 36729388, DOI: 10.1161/strokeaha.122.042265.
- Abstract WMP98: Associations Between Long-term Co, No2, O3, Pm2.5, And So2Exposure And 30-day All-cause Hospital Readmission Among Stroke Patients In The Us: 2014-2015Tran P, Leifheit E, Warren J, Goldstein L, Lichtman J. Abstract WMP98: Associations Between Long-term Co, No2, O3, Pm2.5, And So2Exposure And 30-day All-cause Hospital Readmission Among Stroke Patients In The Us: 2014-2015 Stroke 2023, 54: awmp98-awmp98. DOI: 10.1161/str.54.suppl_1.wmp98.
- Confounding by Conception Seasonality in Studies of Temperature and Preterm Birth: A Simulation StudyHuang M, Strickland M, Richards M, Warren J, Chang H, Darrow L. Confounding by Conception Seasonality in Studies of Temperature and Preterm Birth: A Simulation Study Epidemiology 2023, 34: 439-449. PMID: 36719763, DOI: 10.1097/ede.0000000000001588.
- Assessing unconventional oil and gas exposure in the Appalachian Basin: Comparison of exposure surrogates and drinking water measurements in Ohio and PennsylvaniaClark C, Xiong B, Soriano M, Gutchess K, Siegel H, Ryan E, Johnson N, Cassell K, Elliott E, Li Y, Cox A, Bugher N, Glist L, Brenneis R, Sorrentino K, Plano J, Ma X, Warren J, Plata D, Saiers J, Deziel N. Assessing unconventional oil and gas exposure in the Appalachian Basin: Comparison of exposure surrogates and drinking water measurements in Ohio and Pennsylvania ISEE Conference Abstracts 2022, 2022 DOI: 10.1289/isee.2022.p-0833.
- Unconventional oil and gas exposure and risk of childhood leukemia in PennsylvaniaClark C, Johnson N, Soriano M, Warren J, Sorrentino K, Kadan-Lottick N, Saiers J, Ma X, Deziel N. Unconventional oil and gas exposure and risk of childhood leukemia in Pennsylvania ISEE Conference Abstracts 2022, 2022 DOI: 10.1289/isee.2022.p-0436.
- Critical window variable selection for mixtures: Estimating the impact of multiple air pollutants on stillbirthWarren J, Chang H, Warren L, Strickland M, Darrow L, Mulholland J. Critical window variable selection for mixtures: Estimating the impact of multiple air pollutants on stillbirth The Annals Of Applied Statistics 2022, 16 DOI: 10.1214/21-aoas1560.
- A Bayesian framework for incorporating exposure uncertainty into health analyses with application to air pollution and stillbirth.Comess S, Chang HH, Warren JL. A Bayesian framework for incorporating exposure uncertainty into health analyses with application to air pollution and stillbirth. Biostatistics 2022 PMID: 35984351, DOI: 10.1093/biostatistics/kxac034.
- CRITICAL WINDOW VARIABLE SELECTION FOR MIXTURES: ESTIMATING THE IMPACT OF MULTIPLE AIR POLLUTANTS ON STILLBIRTH.Warren J, Chang H, Warren L, Strickland M, Darrow L, Mulholland J. CRITICAL WINDOW VARIABLE SELECTION FOR MIXTURES: ESTIMATING THE IMPACT OF MULTIPLE AIR POLLUTANTS ON STILLBIRTH. The Annals Of Applied Statistics 2022, 16: 1633-1652. PMID: 36686219, PMCID: PMC9854390, DOI: 10.1214/21-aoas1560.
- Vaccination with BNT162b2 reduces transmission of SARS-CoV-2 to household contacts in IsraelPrunas O, Warren JL, Crawford FW, Gazit S, Patalon T, Weinberger DM, Pitzer VE. Vaccination with BNT162b2 reduces transmission of SARS-CoV-2 to household contacts in Israel Science 2022, 375: 1151-1154. PMID: 35084937, PMCID: PMC9261115, DOI: 10.1126/science.abl4292.
- A discrete kernel stick‐breaking model for detecting spatial boundaries in hydraulic fracturing wastewater disposal well placement across OhioWarren J, Cai J, Johnson N, Deziel N. A discrete kernel stick‐breaking model for detecting spatial boundaries in hydraulic fracturing wastewater disposal well placement across Ohio Journal Of The Royal Statistical Society Series C (Applied Statistics) 2022, 71: 175-193. DOI: 10.1111/rssc.12527.
- Critical Window Variable Selection for Mixtures: Estimating the Impact of Multiple Air Pollutants on StillbirthWarren J, Chang H, Warren L, Strickland M, Darrow L, Mulholland J. Critical Window Variable Selection for Mixtures: Estimating the Impact of Multiple Air Pollutants on Stillbirth ISEE Conference Abstracts 2021, 2021 DOI: 10.1289/isee.2021.o-sy-071.
- SPATIAL DISTRIBUTED LAG DATA FUSION FOR ESTIMATING AMBIENT AIR POLLUTION.Warren JL, Miranda ML, Tootoo JL, Osgood CE, Bell ML. SPATIAL DISTRIBUTED LAG DATA FUSION FOR ESTIMATING AMBIENT AIR POLLUTION. The Annals Of Applied Statistics 2021, 15: 323-342. PMID: 34113416, PMCID: PMC8189329, DOI: 10.1214/20-aoas1399.
- Abstract P91: Excess Cerebrovascular Mortality in the U.S. During the Covid-19 PandemicSharma R, Kuohn L, Weinberger D, Warren J, Sansing L, Jasne A, Falcone G, Dhand A, Sheth K. Abstract P91: Excess Cerebrovascular Mortality in the U.S. During the Covid-19 Pandemic Stroke 2021, 52 DOI: 10.1161/str.52.suppl_1.p91.
- Integrative statistical methods for exposure mixtures and healthReich BJ, Guan Y, Fourches D, Warren JL, Sarnat SE, Chang HH. Integrative statistical methods for exposure mixtures and health The Annals Of Applied Statistics 2020, 14: 1945-1963. PMID: 35284031, PMCID: PMC8914338, DOI: 10.1214/20-aoas1364.
- Saliva or Nasopharyngeal Swab Specimens for Detection of SARS-CoV-2Wyllie AL, Fournier J, Casanovas-Massana A, Campbell M, Tokuyama M, Vijayakumar P, Warren JL, Geng B, Muenker MC, Moore AJ, Vogels CBF, Petrone ME, Ott IM, Lu P, Venkataraman A, Lu-Culligan A, Klein J, Earnest R, Simonov M, Datta R, Handoko R, Naushad N, Sewanan LR, Valdez J, White EB, Lapidus S, Kalinich CC, Jiang X, Kim DJ, Kudo E, Linehan M, Mao T, Moriyama M, Oh JE, Park A, Silva J, Song E, Takahashi T, Taura M, Weizman OE, Wong P, Yang Y, Bermejo S, Odio CD, Omer SB, Dela Cruz CS, Farhadian S, Martinello RA, Iwasaki A, Grubaugh ND, Ko AI. Saliva or Nasopharyngeal Swab Specimens for Detection of SARS-CoV-2 New England Journal Of Medicine 2020, 383: 1283-1286. PMID: 32857487, PMCID: PMC7484747, DOI: 10.1056/nejmc2016359.
- A Nonstationary Spatial Covariance Model for Processes Driven by Point SourcesWarren J. A Nonstationary Spatial Covariance Model for Processes Driven by Point Sources Journal Of Agricultural, Biological And Environmental Statistics 2020, 25: 415-430. DOI: 10.1007/s13253-020-00404-4.
- A spatially varying distributed lag model with application to an air pollution and term low birth weight studyWarren JL, Luben TJ, Chang HH. A spatially varying distributed lag model with application to an air pollution and term low birth weight study Journal Of The Royal Statistical Society Series C (Applied Statistics) 2020, 69: 681-696. PMID: 32595237, PMCID: PMC7319179, DOI: 10.1111/rssc.12407.
- A hierarchical Bayesian model for single-cell clustering using RNA-sequencing dataLiu BY, Warren JL, Zhao H. A hierarchical Bayesian model for single-cell clustering using RNA-sequencing data The Annals Of Applied Statistics 2019, 13: 1733-1752. PMID: 34079613, PMCID: PMC8168892, DOI: 10.1214/19-aoas1250.
- Phylogeny-based tumor subclone identification using a Bayesian feature allocation modelZeng L, Warren J, Zhao H. Phylogeny-based tumor subclone identification using a Bayesian feature allocation model The Annals Of Applied Statistics 2019, 13: 1212-1241. DOI: 10.1214/18-aoas1223.
- Critical window variable selection: estimating the impact of air pollution on very preterm birth.Warren JL, Kong W, Luben TJ, Chang HH. Critical window variable selection: estimating the impact of air pollution on very preterm birth. Biostatistics 2019, 21: 790-806. PMID: 30958877, PMCID: PMC7422642, DOI: 10.1093/biostatistics/kxz006.
- Diagnosing Glaucoma Progression With Visual Field Data Using a Spatiotemporal Boundary Detection MethodBerchuck SI, Mwanza JC, Warren JL. Diagnosing Glaucoma Progression With Visual Field Data Using a Spatiotemporal Boundary Detection Method Journal Of The American Statistical Association 2019, 114: 1063-1074. PMID: 31662589, PMCID: PMC6818507, DOI: 10.1080/01621459.2018.1537911.
- A spatially varying change points model for monitoring glaucoma progression using visual field dataBerchuck SI, Mwanza JC, Warren JL. A spatially varying change points model for monitoring glaucoma progression using visual field data Spatial Statistics 2019, 30: 1-26. PMID: 30931247, PMCID: PMC6438211, DOI: 10.1016/j.spasta.2019.02.001.
- Shale Gas Activity and Increased Rates of Sexually Transmitted Infections in Ohio, 2000-2016Deziel N, Humeau Z, Elliott E, Warren J, Niccolai L. Shale Gas Activity and Increased Rates of Sexually Transmitted Infections in Ohio, 2000-2016 ISEE Conference Abstracts 2018, 2018 DOI: 10.1289/isesisee.2018.p03.2210.
- Factors associated with supermarket and convenience store closure: a discrete time spatial survival modelling approachWarren JL, Gordon‐Larsen P. Factors associated with supermarket and convenience store closure: a discrete time spatial survival modelling approach Journal Of The Royal Statistical Society Series A (Statistics In Society) 2017, 181: 783-802. PMID: 29887675, PMCID: PMC5990034, DOI: 10.1111/rssa.12330.
- Investigating the Impact of Maternal Residential Mobility on Identifying Critical Windows of Susceptibility to Ambient Air Pollution During Pregnancy.Warren JL, Son JY, Pereira G, Leaderer BP, Bell ML. Investigating the Impact of Maternal Residential Mobility on Identifying Critical Windows of Susceptibility to Ambient Air Pollution During Pregnancy. American Journal Of Epidemiology 2017, 187: 992-1000. PMID: 29053768, PMCID: PMC5928458, DOI: 10.1093/aje/kwx335.
- A Dirichlet process mixture model for clustering longitudinal gene expression dataSun J, Herazo‐Maya J, Kaminski N, Zhao H, Warren JL. A Dirichlet process mixture model for clustering longitudinal gene expression data Statistics In Medicine 2017, 36: 3495-3506. PMID: 28620908, PMCID: PMC5583037, DOI: 10.1002/sim.7374.
- A Bayesian semiparametric factor analysis model for subtype identificationSun J, Warren JL, Zhao H. A Bayesian semiparametric factor analysis model for subtype identification Statistical Applications In Genetics And Molecular Biology 2017, 16: 145-158. PMID: 28343169, PMCID: PMC5545128, DOI: 10.1515/sagmb-2016-0051.
- Spatial Variability in the Persistence of Pneumococcal Conjugate Vaccine-targeted Pneumococcal Serotypes Among AdultsWarren JL, Pingali SC, Weinberger DM. Spatial Variability in the Persistence of Pneumococcal Conjugate Vaccine-targeted Pneumococcal Serotypes Among Adults Epidemiology 2017, 28: 119-126. PMID: 27541841, PMCID: PMC5131859, DOI: 10.1097/ede.0000000000000551.
- A Statistical Model to Analyze Clinician Expert Consensus on Glaucoma Progression using Spatially Correlated Visual Field DataWarren JL, Mwanza JC, Tanna AP, Budenz DL. A Statistical Model to Analyze Clinician Expert Consensus on Glaucoma Progression using Spatially Correlated Visual Field Data Translational Vision Science & Technology 2016, 5: 14-14. PMID: 27622079, PMCID: PMC5017314, DOI: 10.1167/tvst.5.4.14.
- Bayesian multinomial probit modeling of daily windows of susceptibility for maternal PM2.5 exposure and congenital heart defectsWarren JL, Stingone JA, Herring AH, Luben TJ, Fuentes M, Aylsworth AS, Langlois PH, Botto LD, Correa A, Olshan AF, Study B. Bayesian multinomial probit modeling of daily windows of susceptibility for maternal PM2.5 exposure and congenital heart defects Statistics In Medicine 2016, 35: 2786-2801. PMID: 26853919, PMCID: PMC4899303, DOI: 10.1002/sim.6891.
- Spatially modelling the association between access to recreational facilities and exercise: the ‘Multi‐ethnic study of atherosclerosis’Berchuck SI, Warren JL, Herring AH, Evenson KR, Moore KA, Ranchod YK, Diez-Roux AV. Spatially modelling the association between access to recreational facilities and exercise: the ‘Multi‐ethnic study of atherosclerosis’ Journal Of The Royal Statistical Society Series A (Statistics In Society) 2015, 179: 293-310. PMID: 26877598, PMCID: PMC4751045, DOI: 10.1111/rssa.12119.
- Assessment of critical exposure and outcome windows in time-to-event analysis with application to air pollution and preterm birth studyChang HH, Warren JL, Darrow LA, Reich BJ, Waller LA. Assessment of critical exposure and outcome windows in time-to-event analysis with application to air pollution and preterm birth study Biostatistics 2015, 16: 509-521. PMID: 25572998, PMCID: PMC5963471, DOI: 10.1093/biostatistics/kxu060.
- Bayesian spatial–temporal model for cardiac congenital anomalies and ambient air pollution risk assessmentWarren J, Fuentes M, Herring A, Langlois P. Bayesian spatial–temporal model for cardiac congenital anomalies and ambient air pollution risk assessment Environmetrics 2012, 23: 673-684. PMID: 23482298, PMCID: PMC3589577, DOI: 10.1002/env.2174.