2016
Chapter 9 Clinical Data Repositories: Warehouses, Registries, and the Use of Standards
Nadkarni P. Chapter 9 Clinical Data Repositories: Warehouses, Registries, and the Use of Standards. 2016, 173-185. DOI: 10.1016/b978-0-12-803130-8.00009-9.Peer-Reviewed Original ResearchOperational data storeData martVirtual data integrationClinical data martClinical data warehouseData storesData warehouseData integrationRapid queryData repositoryData elementsUse of standardsWarehouseData sourcesRepositoryPhysical integrationProcess of extractionQueriesDifferent kindsMartUsabilityData extraction
2014
Chapter 2 Data Integration: An Overview
Nadkarni P, Marenco L. Chapter 2 Data Integration: An Overview. 2014, 15-47. DOI: 10.1016/b978-0-12-401678-1.00002-6.Peer-Reviewed Original ResearchIntegration effortsIntermediary softwareSeamless accessData integration strategyPhysical integrationVirtual integrationData integrationTypes of dataData elementsLogical integrationSource systemSingle large organizationLarge organizationsSingle resourceUsersMultiple sourcesIntegration strategyIntegrationFormal sequenceQueriesMetadataSoftwareStorage technologiesRedundancySystem
2007
Interoperability Across Neuroscience Databases
Marenco L, Nadkarni P, Martone M, Gupta A. Interoperability Across Neuroscience Databases. Methods In Molecular Biology 2007, 401: 23-36. PMID: 18368358, DOI: 10.1007/978-1-59745-520-6_2.Peer-Reviewed Original ResearchConceptsHuman Brain ProjectData interoperabilityData sharingNeuroscience databasesData heterogeneityCurrent data sharingSemantic data modelDatabase interoperabilityWeb servicesMetadata repositoryRobust interoperabilityMetadata annotationData integrationData modelInteroperabilityBrain ProjectInformation frameworkNeuroscience informationIntegration mechanismsSharingConstant creationDomain changesNeuroscience initiativesServicesMultidisciplinary nature
2004
QIS: A Framework for Biomedical Database Federation
Marenco L, Wang TY, Shepherd G, Miller PL, Nadkarni P. QIS: A Framework for Biomedical Database Federation. Journal Of The American Medical Informatics Association 2004, 11: 523-534. PMID: 15298995, PMCID: PMC524633, DOI: 10.1197/jamia.m1506.Peer-Reviewed Original ResearchConceptsNetwork-based serversHeterogeneous data sourcesRobust data integrationIntegration serverOntology serverDatabase federationsSource serverNeuroscience databasesData integrationMediator frameworkServerData elementsQueriesData sourcesMetadataPrototype stageStandard technologyIntegrator systemGenomic databasesFrameworkDatabaseOntologyArchitectureSchemaTechnological expertise