2018
Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum
Kim W, Miguel-Rojas C, Wang J, Townsend JP, Trail F. Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum. MBio 2018, 9: 10.1128/mbio.01292-18. PMID: 30108170, PMCID: PMC6094484, DOI: 10.1128/mbio.01292-18.Peer-Reviewed Original ResearchConceptsSmall RNA clustersSubset of lncRNAsRole of lncRNAsBody formationRNA clustersAntisense lncRNAsSexual developmentDevelopmental stage-specific expression patternsStage-specific expression patternsVegetative growthNonsense-mediated decay pathwayFundamental genomic resourcesMeiotic stagesHundreds of lncRNAsSense-antisense pairsGenome-wide analysisRNA surveillance systemLong Noncoding RNA ExpressionPlant pathogenic fungiNoncoding RNA ExpressionKey regulatory componentOpposite DNA strandsFruiting-body formationMajor staple cropDevelopmental transcriptome
2017
Preface
Townsend JP, Wang Z. Preface. Advances In Genetics 2017, 100: xi-xii. PMID: 29153406, DOI: 10.1016/s0065-2660(17)30059-7.Chapters
2012
Transcriptome analyses during fruiting body formation in Fusarium graminearum and Fusarium verticillioides reflect species life history and ecology
Sikhakolli UR, López-Giráldez F, Li N, Common R, Townsend JP, Trail F. Transcriptome analyses during fruiting body formation in Fusarium graminearum and Fusarium verticillioides reflect species life history and ecology. Fungal Genetics And Biology 2012, 49: 663-673. PMID: 22705880, DOI: 10.1016/j.fgb.2012.05.009.Peer-Reviewed Original ResearchConceptsF. graminearumOrthologous genesLife historyFusarium graminearumF. verticillioidesGene expressionSexual developmentStage-specific gene expressionSpecies' life historyDifferent life historiesPrevious morphological analysesMorphological developmentLife cycleSexual sporesCereal pathogensUnclassified proteinsFunctional assignmentTranscriptional programsTranscriptome analysisTranscriptional analysisType genesEcological characteristicsApoptotic processFusarium speciesGraminearum