2025
Incorporating local ancestry information to predict genetically associated DNA methylation in admixed populations
Cheng Y, Zhou G, Li H, Zhang X, Justice A, Martinez C, Aouizerat B, Xu K, Zhao H. Incorporating local ancestry information to predict genetically associated DNA methylation in admixed populations. Briefings In Bioinformatics 2025, 26: bbaf325. PMID: 40622482, PMCID: PMC12232425, DOI: 10.1093/bib/bbaf325.Peer-Reviewed Original ResearchConceptsMethylome-wide association studiesAdmixed populationsComplex traitsLocal ancestryAssociation studiesDNA methylationAssociated with complex traitsLocal ancestry informationPopulations of European ancestryCpG methylation levelsNon-European populationsMeasurement of methylationAncestry informationCpG sitesMethylation levelsEuropean ancestryEpigenetic underpinningsCpGAncestryTraitsMethylationAmerican populationAfrican American populationDNAPopulationHypermethylation of PM20D1 Is Associated With Carotid Bifurcation Intima‐Media Thickness in Dominican Republic Families
Dueker N, Zhao H, Gardener H, Kaur S, Dong C, Cabral D, Sacco R, Blanton S, Rundek T, Wang L. Hypermethylation of PM20D1 Is Associated With Carotid Bifurcation Intima‐Media Thickness in Dominican Republic Families. Journal Of The American Heart Association 2025, 14: e034033. PMID: 39791430, PMCID: PMC12054445, DOI: 10.1161/jaha.123.034033.Peer-Reviewed Original ResearchConceptsDifferentially Methylated RegionsMendelian randomization analysisCytosine nucleotidesCarotid intima-media thicknessExpression quantitative trait loci studiesRandomization analysisExpression quantitative trait lociIntima-media thicknessQuantitative trait loci studiesEpigenome-wide association studiesQuantitative trait lociTraditional vascular risk factorsBifurcation intima-media thicknessBlood-derived DNAGuanine nucleotide siteLinear mixed model analysisNucleotide sitesVascular risk factorsMeasures of atherosclerosisCarotid bifurcation intima-media thicknessTrait lociAssociation studiesNucleotide methylationLoci studiesGenetic variants
2023
Reply to: Genetic differentiation at probe SNPs leads to spurious results in meQTL discovery
Cheng Y, Li B, Zhang X, Aouizerat B, Zhao H, Xu K. Reply to: Genetic differentiation at probe SNPs leads to spurious results in meQTL discovery. Communications Biology 2023, 6: 1296. PMID: 38129596, PMCID: PMC10739901, DOI: 10.1038/s42003-023-05646-9.Peer-Reviewed Original Research
This site is protected by hCaptcha and its Privacy Policy and Terms of Service apply